IntroductionThis page is a work in progress and contains information to remind myself how to run things.Running ATLAS jobs locallyLog into heplnx109.pp.rl.ac.uk and do kinitsource /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} cd testarea/15.6.6/The analysis Local conditions accessMC DataReal DataTo analyze real data you must set the following environment variables:export FRONTIER_SERVER="(serverurl=http://lcgft-atlas.gridpp.rl.ac.uk:3128/frontierATLAS)" export ATLAS_POOLCOND_PATH=/gridsoft/SL5/atlas/local/conditions/ Running on the gridsource setup.sh -tag=15.6.10,32,setup source /afs/cern.ch/atlas/offline/external/GRID/DA/panda-client/latest/etc/panda/panda_setup.sh Location of filesLocal file for testing purposesathenaCommonFlags.FilesInput = [ "/home/hep/dewhurst/data/mc09_valid.108407.Pythia_directJpsimu4mu4.merge.AOD.e347_s585_s582_r812_r814_tid096141/AOD.096141._000006.pool.root.1"]There is a list of interesting physics runs which can be found here. You can find the runs you are looking for with the atlas run query tool. For the initial data taking period the B-Physics group is putting their Ntuples here. Downloading files to RAL PPDTo download files directly to the dcache storage element at RAL do this:source /afs/cern.ch/atlas/offline/external/GRID/ddm/DQ2Clients/setup.sh export DQ2_LOCAL_SITE_ID=UKI-SOUTHGRID-RALPP_SCRATCHDISK voms-proxy-init -voms atlas dq2-get -S srm://heplnx204.pp.rl.ac.uk:8443/srm/managerv2?SFN=/pnfs/pp.rl.ac.uk/data/atlas/atlasralppdisk/dewhurst/ user.JamesCatmore.155697.f261_m496.muonstream_StandardGRL_prelim_muon_yellowPlus_7TeV-v02-pass1.staco/Make sure you are not in the dcache element (ie do cd $HOME) otherwise you will get an error that you are in a read only file system. Getting ROOT to workTo get root to work correctly do:export LD_LIBRARY_PATH=/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib64:/opt/glite/lib:/opt/glite/lib64:/opt/globus/lib:/opt/lcg/lib:/opt/lcg/lib64:/opt/classads/lib64/:/opt/c-ares/lib:/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/lib/ export ROOTSYS=/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/ export PATH=/usr/kerberos/bin:/opt/d-cache/srm/bin:/opt/d-cache/dcap/bin:/opt/edg/bin:/opt/glite/bin:/opt/globus/bin:/opt/lcg/bin:/usr/local/bin:/bin:/usr/bin:/cern/pro/bin:${ROOTSYS}/bin:/usr/local/sbin:/sbin:/usr/sbin Jpsi InformationAll information is being stored on the sharepoint which can be found here. This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Plots of di-muon candidates can be found here. Meetings of note:
Bd J/psi K0* AnalysisThe next section contains details on the status of the Bd -> J/psi K0* analysis.Athena analaysisThe is done using the Bd2JpsiKstar code written by Adam Barton. The currently available ntuples not using theNtuple slimmingThis is currently done using Pavel script. Julie has run this code which can be found on:heplnx111.pp.rl.ac.uk ls -lrth /scratch/jk67/DataAug2010_ntuples/ total 2.7G -rw-r--r-- 1 jk67 atlas 7.6M Sep 7 13:26 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodB.root -rw-r--r-- 1 jk67 atlas 11M Sep 7 13:27 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodC.root -rw-r--r-- 1 jk67 atlas 500M Sep 7 13:54 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodD.root -rw-r--r-- 1 jk67 atlas 1.6G Sep 7 14:57 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodE.root -rw-r--r-- 1 jk67 atlas 586M Sep 8 09:04 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodF.root Analysis codeCurrently code is in:/home/hep/dewhurst/BdJpsiK0starTo run it do: .L BdJpsiKstar_analysis.cpp+ analysis("/scratch/jk67/DataAug2010_ntuples/", -99,"") | ||||||||
Added: | ||||||||
> > |
FTS script developmentAim is to right a script which plots the numbers that can be found on: http://lcgwww.gridpp.rl.ac.uk/cgi-bin/fts-mon/fts-mon-dev.pl On root@lcgwww.gridpp.rl.ac.uk | |||||||
-- AlastairDewhurst - 2009-10-09 |
IntroductionThis page is a work in progress and contains information to remind myself how to run things.Running ATLAS jobs locallyLog into heplnx109.pp.rl.ac.uk and do kinitsource /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} cd testarea/15.6.6/The analysis Local conditions accessMC DataReal DataTo analyze real data you must set the following environment variables:export FRONTIER_SERVER="(serverurl=http://lcgft-atlas.gridpp.rl.ac.uk:3128/frontierATLAS)" export ATLAS_POOLCOND_PATH=/gridsoft/SL5/atlas/local/conditions/ Running on the gridsource setup.sh -tag=15.6.10,32,setup source /afs/cern.ch/atlas/offline/external/GRID/DA/panda-client/latest/etc/panda/panda_setup.sh Location of filesLocal file for testing purposesathenaCommonFlags.FilesInput = [ "/home/hep/dewhurst/data/mc09_valid.108407.Pythia_directJpsimu4mu4.merge.AOD.e347_s585_s582_r812_r814_tid096141/AOD.096141._000006.pool.root.1"]There is a list of interesting physics runs which can be found here. You can find the runs you are looking for with the atlas run query tool. For the initial data taking period the B-Physics group is putting their Ntuples here. Downloading files to RAL PPDTo download files directly to the dcache storage element at RAL do this:source /afs/cern.ch/atlas/offline/external/GRID/ddm/DQ2Clients/setup.sh export DQ2_LOCAL_SITE_ID=UKI-SOUTHGRID-RALPP_SCRATCHDISK voms-proxy-init -voms atlas dq2-get -S srm://heplnx204.pp.rl.ac.uk:8443/srm/managerv2?SFN=/pnfs/pp.rl.ac.uk/data/atlas/atlasralppdisk/dewhurst/ user.JamesCatmore.155697.f261_m496.muonstream_StandardGRL_prelim_muon_yellowPlus_7TeV-v02-pass1.staco/Make sure you are not in the dcache element (ie do cd $HOME) otherwise you will get an error that you are in a read only file system. Getting ROOT to workTo get root to work correctly do:export LD_LIBRARY_PATH=/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib64:/opt/glite/lib:/opt/glite/lib64:/opt/globus/lib:/opt/lcg/lib:/opt/lcg/lib64:/opt/classads/lib64/:/opt/c-ares/lib:/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/lib/ export ROOTSYS=/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/ export PATH=/usr/kerberos/bin:/opt/d-cache/srm/bin:/opt/d-cache/dcap/bin:/opt/edg/bin:/opt/glite/bin:/opt/globus/bin:/opt/lcg/bin:/usr/local/bin:/bin:/usr/bin:/cern/pro/bin:${ROOTSYS}/bin:/usr/local/sbin:/sbin:/usr/sbin Jpsi InformationAll information is being stored on the sharepoint which can be found here. This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Plots of di-muon candidates can be found here. Meetings of note:
Bd J/psi K0* AnalysisThe next section contains details on the status of the Bd -> J/psi K0* analysis.Athena analaysisThe is done using the Bd2JpsiKstar code written by Adam Barton. The currently available ntuples not using theNtuple slimmingThis is currently done using Pavel script. Julie has run this code which can be found on:heplnx111.pp.rl.ac.uk ls -lrth /scratch/jk67/DataAug2010_ntuples/ total 2.7G -rw-r--r-- 1 jk67 atlas 7.6M Sep 7 13:26 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodB.root -rw-r--r-- 1 jk67 atlas 11M Sep 7 13:27 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodC.root -rw-r--r-- 1 jk67 atlas 500M Sep 7 13:54 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodD.root -rw-r--r-- 1 jk67 atlas 1.6G Sep 7 14:57 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodE.root -rw-r--r-- 1 jk67 atlas 586M Sep 8 09:04 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodF.root Analysis codeCurrently code is in:/home/hep/dewhurst/BdJpsiK0starTo run it do: .L BdJpsiKstar_analysis.cpp+ analysis("/scratch/jk67/DataAug2010_ntuples/", -99,"") | ||||||||
Changed: | ||||||||
< < | ||||||||
> > | ||||||||
Changed: | ||||||||
< < | -- AlastairDewhurst - 2009-10-09 | |||||||
> > | -- AlastairDewhurst - 2009-10-09 |
IntroductionThis page is a work in progress and contains information to remind myself how to run things.Running ATLAS jobs locallyLog into heplnx109.pp.rl.ac.uk and do kinitsource /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} cd testarea/15.6.6/The analysis Local conditions accessMC DataReal DataTo analyze real data you must set the following environment variables:export FRONTIER_SERVER="(serverurl=http://lcgft-atlas.gridpp.rl.ac.uk:3128/frontierATLAS)" export ATLAS_POOLCOND_PATH=/gridsoft/SL5/atlas/local/conditions/ Running on the gridsource setup.sh -tag=15.6.10,32,setup source /afs/cern.ch/atlas/offline/external/GRID/DA/panda-client/latest/etc/panda/panda_setup.sh Location of filesLocal file for testing purposesathenaCommonFlags.FilesInput = [ "/home/hep/dewhurst/data/mc09_valid.108407.Pythia_directJpsimu4mu4.merge.AOD.e347_s585_s582_r812_r814_tid096141/AOD.096141._000006.pool.root.1"]There is a list of interesting physics runs which can be found here. You can find the runs you are looking for with the atlas run query tool. For the initial data taking period the B-Physics group is putting their Ntuples here. Downloading files to RAL PPDTo download files directly to the dcache storage element at RAL do this:source /afs/cern.ch/atlas/offline/external/GRID/ddm/DQ2Clients/setup.sh export DQ2_LOCAL_SITE_ID=UKI-SOUTHGRID-RALPP_SCRATCHDISK voms-proxy-init -voms atlas dq2-get -S srm://heplnx204.pp.rl.ac.uk:8443/srm/managerv2?SFN=/pnfs/pp.rl.ac.uk/data/atlas/atlasralppdisk/dewhurst/ user.JamesCatmore.155697.f261_m496.muonstream_StandardGRL_prelim_muon_yellowPlus_7TeV-v02-pass1.staco/Make sure you are not in the dcache element (ie do cd $HOME) otherwise you will get an error that you are in a read only file system. Getting ROOT to workTo get root to work correctly do:export LD_LIBRARY_PATH=/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib64:/opt/glite/lib:/opt/glite/lib64:/opt/globus/lib:/opt/lcg/lib:/opt/lcg/lib64:/opt/classads/lib64/:/opt/c-ares/lib:/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/lib/ export ROOTSYS=/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/ export PATH=/usr/kerberos/bin:/opt/d-cache/srm/bin:/opt/d-cache/dcap/bin:/opt/edg/bin:/opt/glite/bin:/opt/globus/bin:/opt/lcg/bin:/usr/local/bin:/bin:/usr/bin:/cern/pro/bin:${ROOTSYS}/bin:/usr/local/sbin:/sbin:/usr/sbin Jpsi InformationAll information is being stored on the sharepoint which can be found here. This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Plots of di-muon candidates can be found here. Meetings of note:
Bd J/psi K0* AnalysisThe next section contains details on the status of the Bd -> J/psi K0* analysis.Athena analaysisThe is done using the Bd2JpsiKstar code written by Adam Barton. The currently available ntuples not using theNtuple slimmingThis is currently done using Pavel script. Julie has run this code which can be found on:heplnx111.pp.rl.ac.uk ls -lrth /scratch/jk67/DataAug2010_ntuples/ total 2.7G -rw-r--r-- 1 jk67 atlas 7.6M Sep 7 13:26 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodB.root -rw-r--r-- 1 jk67 atlas 11M Sep 7 13:27 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodC.root -rw-r--r-- 1 jk67 atlas 500M Sep 7 13:54 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodD.root -rw-r--r-- 1 jk67 atlas 1.6G Sep 7 14:57 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodE.root -rw-r--r-- 1 jk67 atlas 586M Sep 8 09:04 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodF.root Analysis code | ||||||||
Changed: | ||||||||
< < | Currently code is in: | |||||||
> > | Currently code is in: | |||||||
Deleted: | ||||||||
< < | ||||||||
/home/hep/dewhurst/BdJpsiK0star | ||||||||
Changed: | ||||||||
< < | To run it do: | |||||||
> > | To run it do: .L BdJpsiKstar_analysis.cpp+ | |||||||
Deleted: | ||||||||
< < | .L BdJpsiKstar.cpp+ | |||||||
analysis("/scratch/jk67/DataAug2010_ntuples/", -99,"") | ||||||||
Changed: | ||||||||
< < | -- AlastairDewhurst - 2009-10-09 | |||||||
> > | -- AlastairDewhurst - 2009-10-09 |
IntroductionThis page is a work in progress and contains information to remind myself how to run things.Running ATLAS jobs locallyLog into heplnx109.pp.rl.ac.uk and do kinitsource /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} cd testarea/15.6.6/The analysis Local conditions accessMC DataReal DataTo analyze real data you must set the following environment variables:export FRONTIER_SERVER="(serverurl=http://lcgft-atlas.gridpp.rl.ac.uk:3128/frontierATLAS)" export ATLAS_POOLCOND_PATH=/gridsoft/SL5/atlas/local/conditions/ Running on the gridsource setup.sh -tag=15.6.10,32,setup source /afs/cern.ch/atlas/offline/external/GRID/DA/panda-client/latest/etc/panda/panda_setup.sh Location of filesLocal file for testing purposesathenaCommonFlags.FilesInput = [ "/home/hep/dewhurst/data/mc09_valid.108407.Pythia_directJpsimu4mu4.merge.AOD.e347_s585_s582_r812_r814_tid096141/AOD.096141._000006.pool.root.1"]There is a list of interesting physics runs which can be found here. You can find the runs you are looking for with the atlas run query tool. For the initial data taking period the B-Physics group is putting their Ntuples here. Downloading files to RAL PPDTo download files directly to the dcache storage element at RAL do this:source /afs/cern.ch/atlas/offline/external/GRID/ddm/DQ2Clients/setup.sh export DQ2_LOCAL_SITE_ID=UKI-SOUTHGRID-RALPP_SCRATCHDISK voms-proxy-init -voms atlas dq2-get -S srm://heplnx204.pp.rl.ac.uk:8443/srm/managerv2?SFN=/pnfs/pp.rl.ac.uk/data/atlas/atlasralppdisk/dewhurst/ user.JamesCatmore.155697.f261_m496.muonstream_StandardGRL_prelim_muon_yellowPlus_7TeV-v02-pass1.staco/Make sure you are not in the dcache element (ie do cd $HOME) otherwise you will get an error that you are in a read only file system. Getting ROOT to workTo get root to work correctly do:export LD_LIBRARY_PATH=/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib64:/opt/glite/lib:/opt/glite/lib64:/opt/globus/lib:/opt/lcg/lib:/opt/lcg/lib64:/opt/classads/lib64/:/opt/c-ares/lib:/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/lib/ export ROOTSYS=/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/ export PATH=/usr/kerberos/bin:/opt/d-cache/srm/bin:/opt/d-cache/dcap/bin:/opt/edg/bin:/opt/glite/bin:/opt/globus/bin:/opt/lcg/bin:/usr/local/bin:/bin:/usr/bin:/cern/pro/bin:${ROOTSYS}/bin:/usr/local/sbin:/sbin:/usr/sbin Jpsi InformationAll information is being stored on the sharepoint which can be found here. This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Plots of di-muon candidates can be found here. Meetings of note: | ||||||||
Added: | ||||||||
> > |
Bd J/psi K0* AnalysisThe next section contains details on the status of the Bd -> J/psi K0* analysis.Athena analaysisThe is done using the Bd2JpsiKstar code written by Adam Barton. The currently available ntuples not using theNtuple slimmingThis is currently done using Pavel script. Julie has run this code which can be found on:heplnx111.pp.rl.ac.uk ls -lrth /scratch/jk67/DataAug2010_ntuples/ total 2.7G -rw-r--r-- 1 jk67 atlas 7.6M Sep 7 13:26 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodB.root -rw-r--r-- 1 jk67 atlas 11M Sep 7 13:27 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodC.root -rw-r--r-- 1 jk67 atlas 500M Sep 7 13:54 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodD.root -rw-r--r-- 1 jk67 atlas 1.6G Sep 7 14:57 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodE.root -rw-r--r-- 1 jk67 atlas 586M Sep 8 09:04 DataAug2010_BdJpsiKstar_jpsiMassConstraint_periodF.root Analysis codeCurrently code is in:/home/hep/dewhurst/BdJpsiK0starTo run it do: .L BdJpsiKstar.cpp+ analysis("/scratch/jk67/DataAug2010_ntuples/", -99,"") </verbaitm> | |||||||
-- AlastairDewhurst - 2009-10-09 |
IntroductionThis page is a work in progress and contains information to remind myself how to run things.Running ATLAS jobs locallyLog into heplnx109.pp.rl.ac.uk and do kinitsource /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} cd testarea/15.6.6/The analysis Local conditions accessMC DataReal Data | ||||||||
Changed: | ||||||||
< < | To analyze real data you must set the following environment variables: | |||||||
> > | To analyze real data you must set the following environment variables: | |||||||
Deleted: | ||||||||
< < | ||||||||
export FRONTIER_SERVER="(serverurl=http://lcgft-atlas.gridpp.rl.ac.uk:3128/frontierATLAS)"
export ATLAS_POOLCOND_PATH=/gridsoft/SL5/atlas/local/conditions/
Running on the gridsource setup.sh -tag=15.6.10,32,setup source /afs/cern.ch/atlas/offline/external/GRID/DA/panda-client/latest/etc/panda/panda_setup.sh Location of filesLocal file for testing purposesathenaCommonFlags.FilesInput = [ "/home/hep/dewhurst/data/mc09_valid.108407.Pythia_directJpsimu4mu4.merge.AOD.e347_s585_s582_r812_r814_tid096141/AOD.096141._000006.pool.root.1"]There is a list of interesting physics runs which can be found here. You can find the runs you are looking for with the atlas run query tool. For the initial data taking period the B-Physics group is putting their Ntuples here. Downloading files to RAL PPDTo download files directly to the dcache storage element at RAL do this:source /afs/cern.ch/atlas/offline/external/GRID/ddm/DQ2Clients/setup.sh | ||||||||
Added: | ||||||||
> > | export DQ2_LOCAL_SITE_ID=UKI-SOUTHGRID-RALPP_SCRATCHDISK | |||||||
voms-proxy-init -voms atlas
dq2-get -S srm://heplnx204.pp.rl.ac.uk:8443/srm/managerv2?SFN=/pnfs/pp.rl.ac.uk/data/atlas/atlasralppdisk/dewhurst/ user.JamesCatmore.155697.f261_m496.muonstream_StandardGRL_prelim_muon_yellowPlus_7TeV-v02-pass1.staco/
Make sure you are not in the dcache element (ie do cd $HOME) otherwise you will get an error that you are in a read only file system.
Getting ROOT to workTo get root to work correctly do:export LD_LIBRARY_PATH=/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib64:/opt/glite/lib:/opt/glite/lib64:/opt/globus/lib:/opt/lcg/lib:/opt/lcg/lib64:/opt/classads/lib64/:/opt/c-ares/lib:/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/lib/ export ROOTSYS=/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/ export PATH=/usr/kerberos/bin:/opt/d-cache/srm/bin:/opt/d-cache/dcap/bin:/opt/edg/bin:/opt/glite/bin:/opt/globus/bin:/opt/lcg/bin:/usr/local/bin:/bin:/usr/bin:/cern/pro/bin:${ROOTSYS}/bin:/usr/local/sbin:/sbin:/usr/sbin Jpsi InformationAll information is being stored on the sharepoint which can be found here. This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Plots of di-muon candidates can be found here. Meetings of note:
|
IntroductionThis page is a work in progress and contains information to remind myself how to run things.Running ATLAS jobs locallyLog into heplnx109.pp.rl.ac.uk and do kinitsource /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} cd testarea/15.6.6/The analysis | ||||||||
Changed: | ||||||||
< < | Running on the grid | |||||||
> > | Local conditions access | |||||||
Added: | ||||||||
> > | MC DataReal DataTo analyze real data you must set the following environment variables: | |||||||
Added: | ||||||||
> > | export FRONTIER_SERVER="(serverurl=http://lcgft-atlas.gridpp.rl.ac.uk:3128/frontierATLAS)"
export ATLAS_POOLCOND_PATH=/gridsoft/SL5/atlas/local/conditions/
Running on the grid | |||||||
source setup.sh -tag=15.6.10,32,setup source /afs/cern.ch/atlas/offline/external/GRID/DA/panda-client/latest/etc/panda/panda_setup.sh | ||||||||
Deleted: | ||||||||
< < | ||||||||
Location of filesLocal file for testing purposesathenaCommonFlags.FilesInput = [ "/home/hep/dewhurst/data/mc09_valid.108407.Pythia_directJpsimu4mu4.merge.AOD.e347_s585_s582_r812_r814_tid096141/AOD.096141._000006.pool.root.1"]There is a list of interesting physics runs which can be found here. You can find the runs you are looking for with the atlas run query tool. For the initial data taking period the B-Physics group is putting their Ntuples here. Downloading files to RAL PPDTo download files directly to the dcache storage element at RAL do this:source /afs/cern.ch/atlas/offline/external/GRID/ddm/DQ2Clients/setup.sh voms-proxy-init -voms atlas dq2-get -S srm://heplnx204.pp.rl.ac.uk:8443/srm/managerv2?SFN=/pnfs/pp.rl.ac.uk/data/atlas/atlasralppdisk/dewhurst/ user.JamesCatmore.155697.f261_m496.muonstream_StandardGRL_prelim_muon_yellowPlus_7TeV-v02-pass1.staco/Make sure you are not in the dcache element (ie do cd $HOME) otherwise you will get an error that you are in a read only file system. Getting ROOT to workTo get root to work correctly do:export LD_LIBRARY_PATH=/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib64:/opt/glite/lib:/opt/glite/lib64:/opt/globus/lib:/opt/lcg/lib:/opt/lcg/lib64:/opt/classads/lib64/:/opt/c-ares/lib:/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/lib/ export ROOTSYS=/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/ export PATH=/usr/kerberos/bin:/opt/d-cache/srm/bin:/opt/d-cache/dcap/bin:/opt/edg/bin:/opt/glite/bin:/opt/globus/bin:/opt/lcg/bin:/usr/local/bin:/bin:/usr/bin:/cern/pro/bin:${ROOTSYS}/bin:/usr/local/sbin:/sbin:/usr/sbin Jpsi InformationAll information is being stored on the sharepoint which can be found here. This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Plots of di-muon candidates can be found here. Meetings of note:
|
IntroductionThis page is a work in progress and contains information to remind myself how to run things.Running ATLAS jobs locallyLog into heplnx109.pp.rl.ac.uk and do kinitsource /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} cd testarea/15.6.6/The analysis Running on the grid | ||||||||
Added: | ||||||||
> > | source setup.sh -tag=15.6.10,32,setup source /afs/cern.ch/atlas/offline/external/GRID/DA/panda-client/latest/etc/panda/panda_setup.sh | |||||||
Added: | ||||||||
> > | ||||||||
Location of filesLocal file for testing purposesathenaCommonFlags.FilesInput = [ "/home/hep/dewhurst/data/mc09_valid.108407.Pythia_directJpsimu4mu4.merge.AOD.e347_s585_s582_r812_r814_tid096141/AOD.096141._000006.pool.root.1"]There is a list of interesting physics runs which can be found here. You can find the runs you are looking for with the atlas run query tool. For the initial data taking period the B-Physics group is putting their Ntuples here. Downloading files to RAL PPDTo download files directly to the dcache storage element at RAL do this:source /afs/cern.ch/atlas/offline/external/GRID/ddm/DQ2Clients/setup.sh voms-proxy-init -voms atlas dq2-get -S srm://heplnx204.pp.rl.ac.uk:8443/srm/managerv2?SFN=/pnfs/pp.rl.ac.uk/data/atlas/atlasralppdisk/dewhurst/ user.JamesCatmore.155697.f261_m496.muonstream_StandardGRL_prelim_muon_yellowPlus_7TeV-v02-pass1.staco/Make sure you are not in the dcache element (ie do cd $HOME) otherwise you will get an error that you are in a read only file system. Getting ROOT to work | ||||||||
Changed: | ||||||||
< < | To get root to work correctly do: | |||||||
> > | To get root to work correctly do: | |||||||
Deleted: | ||||||||
< < | ||||||||
export LD_LIBRARY_PATH=/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib64:/opt/glite/lib:/opt/glite/lib64:/opt/globus/lib:/opt/lcg/lib:/opt/lcg/lib64:/opt/classads/lib64/:/opt/c-ares/lib:/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/lib/
export ROOTSYS=/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/
export PATH=/usr/kerberos/bin:/opt/d-cache/srm/bin:/opt/d-cache/dcap/bin:/opt/edg/bin:/opt/glite/bin:/opt/globus/bin:/opt/lcg/bin:/usr/local/bin:/bin:/usr/bin:/cern/pro/bin:${ROOTSYS}/bin:/usr/local/sbin:/sbin:/usr/sbin
Jpsi InformationAll information is being stored on the sharepoint which can be found here. This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Plots of di-muon candidates can be found here. Meetings of note:
|
IntroductionThis page is a work in progress and contains information to remind myself how to run things.Running ATLAS jobs locallyLog into heplnx109.pp.rl.ac.uk and do kinitsource /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} cd testarea/15.6.6/The analysis Running on the gridLocation of filesLocal file for testing purposesathenaCommonFlags.FilesInput = [ "/home/hep/dewhurst/data/mc09_valid.108407.Pythia_directJpsimu4mu4.merge.AOD.e347_s585_s582_r812_r814_tid096141/AOD.096141._000006.pool.root.1"]There is a list of interesting physics runs which can be found here. You can find the runs you are looking for with the atlas run query tool. For the initial data taking period the B-Physics group is putting their Ntuples here. Downloading files to RAL PPD | ||||||||
Changed: | ||||||||
< < | To download files directly to the dcache storage element at RAL do this: | |||||||
> > | To download files directly to the dcache storage element at RAL do this: | |||||||
Deleted: | ||||||||
< < | ||||||||
source /afs/cern.ch/atlas/offline/external/GRID/ddm/DQ2Clients/setup.sh voms-proxy-init -voms atlas dq2-get -S srm://heplnx204.pp.rl.ac.uk:8443/srm/managerv2?SFN=/pnfs/pp.rl.ac.uk/data/atlas/atlasralppdisk/dewhurst/ user.JamesCatmore.155697.f261_m496.muonstream_StandardGRL_prelim_muon_yellowPlus_7TeV-v02-pass1.staco/ | ||||||||
Added: | ||||||||
> > | Make sure you are not in the dcache element (ie do cd $HOME) otherwise you will get an error that you are in a read only file system.
Getting ROOT to workTo get root to work correctly do:export LD_LIBRARY_PATH=/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib:/opt/d-cache/dcap/lib64:/opt/glite/lib:/opt/glite/lib64:/opt/globus/lib:/opt/lcg/lib:/opt/lcg/lib64:/opt/classads/lib64/:/opt/c-ares/lib:/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/lib/ export ROOTSYS=/opt/ppd/root/5.26.00/x86_64-slc5-gcc34-opt/root/ export PATH=/usr/kerberos/bin:/opt/d-cache/srm/bin:/opt/d-cache/dcap/bin:/opt/edg/bin:/opt/glite/bin:/opt/globus/bin:/opt/lcg/bin:/usr/local/bin:/bin:/usr/bin:/cern/pro/bin:${ROOTSYS}/bin:/usr/local/sbin:/sbin:/usr/sbin | |||||||
Deleted: | ||||||||
< < | Make sure you are not in the dcache element (ie do cd $HOME) otherwise you will get an error that you are in a read only file system. | |||||||
Jpsi InformationAll information is being stored on the sharepoint which can be found here. This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Plots of di-muon candidates can be found here. Meetings of note:
|
IntroductionThis page is a work in progress and contains information to remind myself how to run things.Running ATLAS jobs locallyLog into heplnx109.pp.rl.ac.uk and do kinitsource /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} cd testarea/15.6.6/The analysis Running on the gridLocation of filesLocal file for testing purposesathenaCommonFlags.FilesInput = [ "/home/hep/dewhurst/data/mc09_valid.108407.Pythia_directJpsimu4mu4.merge.AOD.e347_s585_s582_r812_r814_tid096141/AOD.096141._000006.pool.root.1"]There is a list of interesting physics runs which can be found here. You can find the runs you are looking for with the atlas run query tool. For the initial data taking period the B-Physics group is putting their Ntuples here. | ||||||||
Added: | ||||||||
> > |
Downloading files to RAL PPDTo download files directly to the dcache storage element at RAL do this:source /afs/cern.ch/atlas/offline/external/GRID/ddm/DQ2Clients/setup.sh voms-proxy-init -voms atlas dq2-get -S srm://heplnx204.pp.rl.ac.uk:8443/srm/managerv2?SFN=/pnfs/pp.rl.ac.uk/data/atlas/atlasralppdisk/dewhurst/ user.JamesCatmore.155697.f261_m496.muonstream_StandardGRL_prelim_muon_yellowPlus_7TeV-v02-pass1.staco/Make sure you are not in the dcache element (ie do cd $HOME) otherwise you will get an error that you are in a read only file system. | |||||||
Jpsi InformationAll information is being stored on the sharepoint which can be found here. This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Plots of di-muon candidates can be found here. Meetings of note:
|
IntroductionThis page is a work in progress and contains information to remind myself how to run things.Running ATLAS jobs locallyLog into heplnx109.pp.rl.ac.uk and do kinitsource /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} cd testarea/15.6.6/The analysis Running on the gridLocation of filesLocal file for testing purposesathenaCommonFlags.FilesInput = [ "/home/hep/dewhurst/data/mc09_valid.108407.Pythia_directJpsimu4mu4.merge.AOD.e347_s585_s582_r812_r814_tid096141/AOD.096141._000006.pool.root.1"]There is a list of interesting physics runs which can be found here. You can find the runs you are looking for with the atlas run query tool. For the initial data taking period the B-Physics group is putting their Ntuples here. Jpsi InformationAll information is being stored on the sharepoint which can be found here. This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Plots of di-muon candidates can be found here. Meetings of note: | ||||||||
Added: | ||||||||
> > | ||||||||
|
IntroductionThis page is a work in progress and contains information to remind myself how to run things.Running ATLAS jobs locallyLog into heplnx109.pp.rl.ac.uk and do kinitsource /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} cd testarea/15.6.6/The analysis Running on the gridLocation of filesLocal file for testing purposesathenaCommonFlags.FilesInput = [ "/home/hep/dewhurst/data/mc09_valid.108407.Pythia_directJpsimu4mu4.merge.AOD.e347_s585_s582_r812_r814_tid096141/AOD.096141._000006.pool.root.1"]There is a list of interesting physics runs which can be found here. You can find the runs you are looking for with the atlas run query tool. For the initial data taking period the B-Physics group is putting their Ntuples here. Jpsi Information | ||||||||
Changed: | ||||||||
< < | All information is being stored on the sharepoint which can be found [https://espace.cern.ch/atlas-phys-beauty/default.aspx][here]]. This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Plots of di-muon candidates can be found here. | |||||||
> > | All information is being stored on the sharepoint which can be found here. This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Plots of di-muon candidates can be found here. | |||||||
Meetings of note:
|
IntroductionThis page is a work in progress and contains information to remind myself how to run things.Running ATLAS jobs locallyLog into heplnx109.pp.rl.ac.uk and do kinitsource /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} | ||||||||
Added: | ||||||||
> > | cd testarea/15.6.6/ | |||||||
Added: | ||||||||
> > | The analysis | |||||||
Running on the gridLocation of filesLocal file for testing purposesathenaCommonFlags.FilesInput = [ "/home/hep/dewhurst/data/mc09_valid.108407.Pythia_directJpsimu4mu4.merge.AOD.e347_s585_s582_r812_r814_tid096141/AOD.096141._000006.pool.root.1"] | ||||||||
Changed: | ||||||||
< < | There is a list of interesting physics runs which can be found here. | |||||||
> > | There is a list of interesting physics runs which can be found here. You can find the runs you are looking for with the atlas run query tool. For the initial data taking period the B-Physics group is putting their Ntuples here. | |||||||
Deleted: | ||||||||
< < | You can find the runs you are looking for with the atlas run query tool. For the initial data taking period the B-Physics group is putting their Ntuples [https://twiki.cern.ch/twiki/bin/view/AtlasProtected/BPhysicsWorkingGroupData][here]]. | |||||||
Jpsi Information | ||||||||
Changed: | ||||||||
< < | All information is being stored on the sharepoint which can be found [https://espace.cern.ch/atlas-phys-beauty/default.aspx][here]]. | |||||||
> > | All information is being stored on the sharepoint which can be found [https://espace.cern.ch/atlas-phys-beauty/default.aspx][here]]. This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Plots of di-muon candidates can be found here. | |||||||
Deleted: | ||||||||
< < | This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Plots of di-muon candidates can be found [https://atlas.web.cern.ch/Atlas/GROUPS/PHYSICS/BPHYSICS/dimuon/index.htm][here]]. | |||||||
Meetings of note:
|
IntroductionThis page is a work in progress and contains information to remind myself how to run things.Running ATLAS jobs locallyLog into heplnx109.pp.rl.ac.uk and do kinitsource /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} Running on the gridLocation of filesLocal file for testing purposesathenaCommonFlags.FilesInput = [ "/home/hep/dewhurst/data/mc09_valid.108407.Pythia_directJpsimu4mu4.merge.AOD.e347_s585_s582_r812_r814_tid096141/AOD.096141._000006.pool.root.1"] | ||||||||
Added: | ||||||||
> > | There is a list of interesting physics runs which can be found here. | |||||||
You can find the runs you are looking for with the atlas run query tool. | ||||||||
Added: | ||||||||
> > | For the initial data taking period the B-Physics group is putting their Ntuples [https://twiki.cern.ch/twiki/bin/view/AtlasProtected/BPhysicsWorkingGroupData][here]]. | |||||||
Jpsi Information | ||||||||
Changed: | ||||||||
< < | This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. | |||||||
> > | All information is being stored on the sharepoint which can be found [https://espace.cern.ch/atlas-phys-beauty/default.aspx][here]]. | |||||||
Added: | ||||||||
> > | This information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Plots of di-muon candidates can be found [https://atlas.web.cern.ch/Atlas/GROUPS/PHYSICS/BPHYSICS/dimuon/index.htm][here]]. | |||||||
Added: | ||||||||
> > | ||||||||
Meetings of note: | ||||||||
Changed: | ||||||||
< < | ||||||||
> > | ||||||||
-- AlastairDewhurst - 2009-10-09 |
IntroductionThis page is a work in progress and contains information to remind myself how to run things.Running ATLAS jobs locallyLog into heplnx109.pp.rl.ac.uk and do kinitsource /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} Running on the gridLocation of files | ||||||||
Changed: | ||||||||
< < | Local file for testing purposes | |||||||
> > | Local file for testing purposes | |||||||
Deleted: | ||||||||
< < | ||||||||
athenaCommonFlags.FilesInput = [ "/home/hep/dewhurst/data/mc09_valid.108407.Pythia_directJpsimu4mu4.merge.AOD.e347_s585_s582_r812_r814_tid096141/AOD.096141._000006.pool.root.1"] | ||||||||
Added: | ||||||||
> > | You can find the runs you are looking for with the atlas run query tool. | |||||||
Added: | ||||||||
> > | Jpsi InformationThis information is likely to become rapidly out of date. There is a daily BPhys meeting at 3pm (UK time) via Evo. Meetings of note: | |||||||
-- AlastairDewhurst - 2009-10-09 |
IntroductionThis page is a work in progress and contains information to remind myself how to run things. | ||||||||
Changed: | ||||||||
< < | Running ATLAS jobsLog into heplnx109.pp.rl.ac.uk | |||||||
> > | Running ATLAS jobs locallyLog into heplnx109.pp.rl.ac.uk and do kinit | |||||||
Added: | ||||||||
> > | ||||||||
Changed: | ||||||||
< < | > source /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 > export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} | |||||||
> > | source /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} | |||||||
Added: | ||||||||
> > |
Running on the gridLocation of filesLocal file for testing purposesathenaCommonFlags.FilesInput = [ "/home/hep/dewhurst/data/mc09_valid.108407.Pythia_directJpsimu4mu4.merge.AOD.e347_s585_s582_r812_r814_tid096141/AOD.096141._000006.pool.root.1"] | |||||||
-- AlastairDewhurst - 2009-10-09 |
IntroductionThis page is a work in progress and contains information to remind myself how to run things.Running ATLAS jobs | ||||||||
Changed: | ||||||||
< < | Log into heplnx109.pp.rl.ac.uk | |||||||
> > | Log into heplnx109.pp.rl.ac.uk
> source /gridsoft/SL5/atlas/software/15.6.6/setup.sh -tag=15.6.6,setup,32 > export CMTPATH=${HOME}/testarea/15.6.6:${CMTPATH} | |||||||
Added: | ||||||||
> > | ||||||||
-- AlastairDewhurst - 2009-10-09 |
Introduction | |||||||||||||||||||
Changed: | |||||||||||||||||||
< < | This page contains a guide to working on the RAL cluster | ||||||||||||||||||
> > | This page is a work in progress and contains information to remind myself how to run things. | ||||||||||||||||||
Changed: | |||||||||||||||||||
< < | Hardware Description of nodes, CPU, disk space.The Tier 2 at RAL is made up of roughly | ||||||||||||||||||
> > | Running ATLAS jobsLog into heplnx109.pp.rl.ac.uk | ||||||||||||||||||
Deleted: | |||||||||||||||||||
< < | Logging into the Cluster | ||||||||||||||||||
Deleted: | |||||||||||||||||||
< < | The names of the computers you want to log into are:
Accessing the cluster from the internal networkYou can log into theAccessing the cluster from offsiteSetting up AthenaOnce you have logged into a machine you need to set up Athena. The instructions to set up Athena can be found at WorkBookSetAccount. In order to be able to setup Athena following the link you need to know The Athena releases are stored at /raid/expt-sw/SL4/atlas/prod/releases/rel_15-4/CMT/*/mgr/setup.shRunning JobsRunning test JobsRunning Large Jobs | ||||||||||||||||||
-- AlastairDewhurst - 2009-10-09 |
IntroductionThis page contains a guide to working on the RAL clusterHardware Description of nodes, CPU, disk space.The Tier 2 at RAL is made up of roughlyLogging into the ClusterThe names of the computers you want to log into are:
Accessing the cluster from the internal networkYou can log into theAccessing the cluster from offsiteSetting up AthenaOnce you have logged into a machine you need to set up Athena. The instructions to set up Athena can be found at WorkBookSetAccount. In order to be able to setup Athena following the link you need to know The Athena releases are stored at /raid/expt-sw/SL4/atlas/prod/releases/rel_15-4/CMT/*/mgr/setup.shRunning JobsRunning test JobsRunning Large Jobs-- AlastairDewhurst - 2009-10-09 |